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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929830.1_cds_XP_016477042.1_68817
CDS Infomation

[gene=LOC107798544] [db_xref=GeneID:107798544] [protein=zinc finger protein JACKDAW-like] [protein_id=XP_016477042.1] [location=complement(join(87581..88520,88886..89285,89743..89878))] [gbkey=CDS]
Sequence

ATGATGTCTGGAGATGTTTTTTCATTTCCTTCTTCTGTTAAAGCAGTACTACCTCAACAT
GAACTTCAAACAAACCCTAACCCTAGACCTAATCCTTCTTCTTCCAAGAAAAGAAGAAAT
CTTCCTGGAACACCAGATCCAGATGCTGAAGTTATTGCTCTTTCACCAAAGTCACTCATG
GCTACAAACAGATTTTTATGTGAAATCTGCAACAAAGGTTTTCAAAGGGACCAAAATTTG
CAACTTCATAGAAGAGGACACAATCTTCCATGGAAGCTAAAACAAAGAAATAAAGACGAA
ATAGTGAAGAAGAAAGTGTATATTTGTCCAGAAAAGACTTGTATTCACCATGATGCATCA
CGTGCACTTGGAGATCTCACTGGAATAAAGAAACATTTTAGCAGAAAACATGGAGAAAAG
AAATGGAAGTGTGAGAAATGTTCAAAGAAGTATGCAGTTCAATCAGATTGGAAAGCTCAT
AGTAAAACTTGTGGAACTAGAGAGTACAAATGTGACTGTGGCACACTCTTTTCCAGAAAA
GATAGTTTTATCACACACAGAGCTTTCTGTGATGCTTTAGCTGAGGAGAGTTCAAGAATC
ACTTCAGTTGGGGCTAACAATATGAACTTCCCAAATATTAATGACACCCTTTTGAACCAG
CAGTCTAATTTGCATGGGATTTCCCAAATCGGAACATTTTATAGACCAGAATTTGGTAAT
GGGAATTCTCTTAATCAGCAGCAGCAGAAACCAAGATTATCACTTTGGTTAGATCAAGCT
AATAATAATCCTCTTCAAATGTCTGCAAATTCAAATCTTTTCGAGTCAACCACTACAAGT
GGATTTGTAGATATGATGCAAATGCCTTCTTCAAATGTCTTTGGATCATCTTCAACAGTT
GCAAACTTTTCACTATCTTCATCACAAGGCACTTCAATGGCTGAAACTTTAAGTTCTTTG
TATTCTGATAGTACTCAAAATAACCATTTAGCCAAATCTTCAACGCCAATGTCAGCCACT
GCACTTTTACAAAAAGCTGCTCAAATGGGTTCTACAAAAAGCAACCAAAGTACTGTCTTT
AGCAACAGTTTCAACTTAATGAGCTCTTCTTCTTCTTCTCCGTCAAATACACCAACCTTT
AGCAGTTTGCATAGTAGTGAAACAACAGATCAAAAATTCCCCAAATTATCCCAAGATTAC
ACAGTATCCTTGGCAGAGGGCAATGGTGGACTCATTTTGTGTACAAATTTTAGTTCGTCG
GCAAATACTAAGGCAATAAATCTGGATCAGGCAATTATGCAAACAGTTGGCATGCAGACT
CCAGCAGTTCCGATGAACATGCAGCAGGGAATGAATAATTGTCTAACGAGAGATTTCTTA
GGCATTAGAAATGAGCCATTTTTGTCACAAGAGATGGCTAAGTTTGCTTCAATGAGTTCA
GCTATGGGGTTGAGCCATTACAGTAGCAGTCACTAG

Peptide Sequence

PEP ID

XP_016477042.1
PEP Infomation

PREDICTED: zinc finger protein JACKDAW-like [Nicotiana tabacum]
Sequence

MMSGDVFSFPSSVKAVLPQHELQTNPNPRPNPSSSKKRRNLPGTPDPDAEVIALSPKSLM
ATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKDEIVKKKVYICPEKTCIHHDAS
RALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRK
DSFITHRAFCDALAEESSRITSVGANNMNFPNINDTLLNQQSNLHGISQIGTFYRPEFGN
GNSLNQQQQKPRLSLWLDQANNNPLQMSANSNLFESTTTSGFVDMMQMPSSNVFGSSSTV
ANFSLSSSQGTSMAETLSSLYSDSTQNNHLAKSSTPMSATALLQKAAQMGSTKSNQSTVF
SNSFNLMSSSSSSPSNTPTFSSLHSSETTDQKFPKLSQDYTVSLAEGNGGLILCTNFSSS
ANTKAINLDQAIMQTVGMQTPAVPMNMQQGMNNCLTRDFLGIRNEPFLSQEMAKFASMSS
AMGLSHYSSSH

Transcript Sequence

Gene sequence data has not been registered.